Open Source Software for Epidemiology

Pinned Repositories

agate
OBiBa's user ID provider.
Language:Java47
docker-opal
Language:Shell7 5 1811
magma
Data and meta-data abstraction layer.
Language:Java6 9 24414
mica
Mica is a web portal for epidemiological study consortia.
Language:PHP49
mica2
Mica is a web portal for epidemiological study consortia.
Language:Java10 9 2.1k15
obiba-commons
Reusable code for persistence (hibernate), security, spring and wicket.
Language:Java59
onyx
Web-based application that manages participant baseline interviews at assessment centres or clinics.
Language:Java6 11 1.5k13
opal
OBiBa’s core database application for biobanks or epidemiological studies.
Language:Java29 14 2.8k22
opal-python-client
Python command lines for accessing Opal web services.
Language:Python43
rock
R server with a REST API
Language:Java3 7 131

Open Source Software for Epidemiology's Repositories

obiba/opal
OBiBa’s core database application for biobanks or epidemiological studies.
Language:Java29 14 2.8k22
obiba/mica2
Mica is a web portal for epidemiological study consortia.
Language:Java10 9 2.1k15
obiba/docker-opal
Language:Shell7 5 1811
obiba/magma
Data and meta-data abstraction layer.
Language:Java6 9 24414
obiba/obiba-commons
Reusable code for persistence (hibernate), security, spring and wicket.
Language:Java59
obiba/agate
OBiBa's user ID provider.
Language:Java47
obiba/rock
R server with a REST API
Language:Java3 7 131
obiba/opal-doc
Opal documentation
Language:Python2 6 63
obiba/amber
Data collection server
Language:JavaScript11
obiba/amber-studio
Content management app for Amber
Language:Vue1 7 171
obiba/docker-agate
Language:Shell13
obiba/docker-r
Docker image with R inside and a lot of system libs
Language:Dockerfile1 6 0
obiba/agate-doc
Agate documentation
Language:Python
obiba/amber-visit
Amber client app for collecting interview data
Language:JavaScript
obiba/amberr
Amber R client
Language:R
obiba/docker-amber
Docker images for Amber server and apps
Language:Dockerfile
obiba/docker-mica
Language:Shell3
obiba/docker-rock
Rock R server in a Docker container
Language:Shell1
obiba/magma-datasource-spss
Magma datasource to read SPSS files
Language:Java
obiba/mica-doc
Mica documentation
Language:Python2
obiba/mica-python-client
Python command lines for accessing Mica web services.
Language:Python
obiba/mica-search-es
Mica search plugin based on Elasticsearch
Language:Java8 41
obiba/mica-search-es7
Language:Java7 01
obiba/mica-search-es8
Language:Java
obiba/mica-tables-spss
Mica study table source plugin based on a SPSS file
Language:Java
obiba/micar
R package for accessing Mica2 web services
Language:R9 3
obiba/obiba-home
Obiba development environment
Language:HTML9 12
obiba/obiba.github.io
Obiba Website
Language:HTML2
obiba/plugins
OBiBa plugins repository
obiba/rock-doc
Rock R server documentation
Language:Python