Question in test folder hapmap for b37 chr20

[BJWiley233]

Hi,
I noticed the file in test folder chr20.b37.gmap.gz is the same as that supplied by beagle. But this is different that what you get from Eagle download here with name genetic_map_hg19.txt.gz. Would anyone know where to understand these different positions and cMs?

[odelaneau]

Hi,

I tested multiple versions of the genetic maps and it has no real impact. You can use the version you want as soon as it is correctly formatted.

Best,

Olivier.

[BJWiley233]

Ok thank you!