Reference dataset for Phase 3
Anahit19 opened this issue · 0 comments
Anahit19 commented
Hi,
I downloaded the reference dataset from 1000G:
https://mathgen.stats.ox.ac.uk/impute/1000GP_Phase3.html
However, while running shapeit5 I got this error:
Opening 1000GP_Phase3_chr22.hap.gz: file format not supported by HTSlib.
Could you please help with this issue?
Thanks!
Anahit