peng-lab/BaSiCPy

Command line interface

Opened this issue · 4 comments

it would be great if we have some __main__.py

have you tried just wrapping the Basic object using fire.Fire for this? it's not always super snappy in the cli but it's dead easy to get something working with minimal overhead. I'd be happy to submit a PR if you let me know what branch / commit to work against.

Hi thanks @donovanr! I'm sorry for the late response, but we decided to go ahead with click. Not sure if we include this in the beta release but hopefully it will come soon.

looking forward to it :)

We somehow released the beta version without CLI (we still have a discussion on its maintenance cost and compatibility with microscopy file types).