pennekampster's Stars
weecology/MATSS-forecasting
Forecasting Analysis Comparison for Ecological Time Series
weecology/MATSS-startup
Macroecological Analysis of Time Series Structure
wpetry/StructuralCoexistence
Shiny app to explore structural approach to species coexistence
jennybc/row-oriented-workflows
Row-oriented workflows in R with the tidyverse
aharmer/pathtrackr
An R package for video tracking and analysing animal movement
mrecos/rvision_examples
code examples of experimenting with the Rvision package
swarm-lab/Rvision
Basic computer vision library for R
virgile-baudrot/trophicR
trophicR is an R package to facilitate model-fitting of functional responses (trophic interactions) using a Bayesian approach with Stan via the rstan package.
JimMcL/trajr
Trajectory Analysis in R
foodwebster/PyEcoNets
Ecological network analysis, and structural and dynamical models
dpritchard/frair
Tools for Functional Response Analysis
lkshrsch/gLVInterNetworks
Inference of interaction networks from time series data fitting a generalized Lotka Volterra model
christerry/ATNmcmc
Code to enable relatively simple implementation of MCMC fitting of trophic dynamic food web models in C++
miguelfortuna/avida_host-parasite
Configuration files and data set used in the following study: "Non-adaptive origins of evolutionary innovations increase network complexity in interacting digital organisms", published in the special issue entitled "Innovations: from cells to societies" of the journal Philosophical Transactions of the Royal Society of London B. (2017).
fishjord/avida_predation_scripts
Scripts developed for supporting predator runs in avida
mabarbour/FoodWebs
R code for exploring theoretical concepts introduced in Kevin McCann's book on "Food Webs"
aloctavodia/Statistical-Rethinking-with-Python-and-PyMC3
Python/PyMC3 port of the examples in " Statistical Rethinking A Bayesian Course with Examples in R and Stan" by Richard McElreath
JanBaert/Per-capita-interactions-and-stress-tolerance-drive-stress-induced-changes-in-biodiversity-effects
Code and data for "Per capita interactions and stress tolerance drive stress-induced changes in biodiversity effects on ecosystem functions"
noamross/rexr
An R wrapper for the rexpy python module
cobeylab/pyembedding
Python implementation of nonlinear embedding methods
NCEAS/codyn
Community dynamics metrics
SugiharaLab/rEDM
Applications of Empirical Dynamic Modeling from Time Series