pinellolab/scATAC-benchmarking

Buenrostro2018 raw data paired end?

jmschrei opened this issue · 0 comments

Hello!

Maybe this isn't the right place, since you're just hosting the data, but I tried downloading the Buenrostro 2018 raw data from dropbox and each of the bed files (after converting the bams using bedtools bamtobed seems to have a strand. Am I right in assuming that the strand information is not right, and each read is paired-end? Or is each read single-end and needs to be matched and extended?

Thanks!