rstudio 1.3.1073
Closed this issue · 10 comments
Hi, Is there a possibility to update Dockerfiles in https://github.com/ppc64le/build-scripts/tree/master/rstudio/Dockerfiles to support the newest version of RStudio and possibly R version 4.0.2
Thanks
I've tried with ENV RStduio_VERSION 1.3.1073 in https://github.com/ppc64le/build-scripts/blob/master/rstudio/Dockerfiles/v1.2.1335/Dockerfile_R_3.6.1 but I got the following
Error: Unsupported Debian release The command '/bin/sh -c wget https://github.com/rstudio/rstudio/archive/v${RStduio_VERSION}.tar.gz && tar zxvf v${RStduio_VERSION}.tar.gz && mkdir -p /rstudio-${RStduio_VERSION}/build && cd /rstudio-${RStduio_VERSION}/dependencies/linux && ./install-dependencies-debian --exclude-qt-sdk && cd /rstudio-${RStduio_VERSION}/build && cmake .. -DRSTUDIO_TARGET=Server -DCMAKE_BUILD_TYPE=Release && make install && useradd -r rstudio-server && cp /usr/local/lib/rstudio-server/extras/init.d/debian/rstudio-server /etc/init.d/ && update-rc.d rstudio-server defaults && ln -f -s /usr/local/lib/rstudio-server/bin/rstudio-server /usr/sbin/rstudio-server && mkdir -p /var/run/rstudio-server && mkdir -p /var/lock/rstudio-server && mkdir -p /var/log/rstudio-server && mkdir -p /var/lib/rstudio-server && set -e && useradd -m -d /home/rstudio -G sudo rstudio && echo rstudio:rstudio | chpasswd && rstudio-server online && cd / && echo -e '#!/bin/bash\ncd /usr/sbin\nrstudio-server start' >> startup.sh && chmod +x startup.sh' returned a non-zero code: 1
@sebacea did you copy/paste or re-type your line with ENV above - RStudio has a typo. Not saying that is the problem. Apologies for the delay in responding, our team has been very loaded lately but we'll try to get you a more complete answer in the next few days.
@gerrith3 the typo is also present in the code. But, as you noticed, it is not the problem because the typo is consistent in the Dockerfile
Haha okay - we have to fix that, too, then! ;) Thanks for the bug report and the enhancement request, all in one.
@sebacea @gerrith3 sorry for the delay on this. I will coorect the typo, and the above error that you are seeing is likely due to the fact that the base image https://hub.docker.com/r/ppc64le/openjdk/ used in this Dockerfile is now no longer supported officially for Power , so we will likely need to use an equivalent adoptopenjdk image as the base
FYI, I am trying to build this with adoptopenjdk:8-jdk-openj9-bionic as the base, however the build for R-4.0.2 is failing with what looks like a change in the dependency list, I am looking into this but it may take a bit to get through the build completely..
@sebacea
I am trying with
ENV R_VERSION 4.0.2
ENV RStudio_VERSION 1.3.1073
Progress: R-4.0.2 is installing
Question is- PCRE2 is recommended for regex during build but pcre1 flag can be used. I have used --with-pcre1 for now.
PS: I have hit the same issue. Taking alternative course of trying with adoptopenjdk
New crashpad module(crash reporting) is disabled for now and script is failing in final steps. Expecting to get it sorted soon.
Installation path: /usr/local/bin/sentry-cli
Warning: this script is currently running as root. This is dangerous.
Instead run it as normal user. We will sudo as needed.
error: your platform and architecture (Linux-ppc64le) is unsupported.
**CMake Error: The source directory "/rstudio-1.3.1073/dependencies" does not appear to contain CMakeLists.txt.**
Specify --help for usage, or press the help button on the CMake GUI.
it is not working for me after docker build -t, I got
[ 56%] Building CXX object src/cpp/server/CMakeFiles/rserver.dir/ServerAddins.cpp.o
[ 56%] Linking CXX executable rserver
[ 56%] Built target rserver
Makefile:151: recipe for target 'all' failed
make: *** [all] Error 2
The command '/bin/sh -c echo "exit 0" > /rstudio-${RStudio_VERSION}/dependencies/common/install-crashpad && cd /rstudio-${RStudio_VERSION}/dependencies/linux && sed -i s/amd64/ppc64el/g ./install-dependencies-bionic && ./install-dependencies-bionic && cd /rstudio-${RStudio_VERSION}/build && cmake -j4 .. -DRSTUDIO_TARGET=Server -DCMAKE_BUILD_TYPE=Release && make -j4 install && useradd -r rstudio-server && cp /usr/local/lib/rstudio-server/extras/init.d/debian/rstudio-server /etc/init.d/ && update-rc.d rstudio-server defaults && ln -f -s /usr/local/lib/rstudio-server/bin/rstudio-server /usr/sbin/rstudio-server && mkdir -p /var/run/rstudio-server && mkdir -p /var/lock/rstudio-server && mkdir -p /var/log/rstudio-server && mkdir -p /var/lib/rstudio-server && set -e && useradd -m -d /home/rstudio -G sudo rstudio && echo rstudio:rstudio | chpasswd && rstudio-server online && cd / && echo -e '#!/bin/bash\ncd /usr/sbin\nrstudio-server start' >> startup.sh && chmod +x startup.sh' returned a non-zero code: 2
Originally posted by @sebacea in #269 (comment)
Wrt new version of Dockerfile, I have cleaned and rebuilt the image once again as shown in the s/s. Could you please use a new name as it is not clear from the quoted command above? Lets give a new name docker build -t <new_name> . and do a clean rebuild?
It works! Many, many thanks!
Originally posted by @sebacea in #269 (comment)
Hence closing the issue.
Thanks