precimed/mixer

Issues

• Do MiXeR and conjFDR allow sample overlap in the summary-level GWAS?

  #96 opened 6 months ago by yiminzhao
  3

• RuntimeError: exception: vector::_M_range_check: __n Error

  #95 opened 5 months ago by dxy257
  2

• runtime_error: csr_ld_val_index_[r2_index] == csr_ld_val_index_[r2_index + 1]

  #62 opened 2 years ago by JujiaoKang
  1

• CMake Error at zlib/CMakeLists.txt:49 (add_subdirectory): add_subdirectory given source "zlib" which is not an existing directory

  #101 opened 2 months ago by xiangboyulan
  0

• Issue with svec Values and Missing Trait in Power File and Image

  #100 opened 2 months ago by BeataLILILI
  0

• ctypes.ArgumentError: argument 5: TypeError: array must have data type float32

  #99 opened 4 months ago by zmli0831
  0

• bivariate -logLikelihood plot

  #98 opened 5 months ago by dqq0404
  0

• Sample overlap

  #94 opened 5 months ago by dqq0404
  0

• Runtime Error in bivariate

  #97 opened 5 months ago by dqq0404
  0

• RuntimeWarning: divide by zero encountered in log10

  #86 opened a year ago by NicolasC0
  0

• Segmentation fault (core dumped)

  #93 opened 7 months ago by olasunkanmibamidele
  1

• RuntimeError: runtime_error: arg <= 0

  #71 opened 2 years ago by 1999yangyi
  3

• mixer.py fit2 hanging on calc_unified_bivariate_pdf

  #84 opened a year ago by EleniFri
  1

• power plot is blank and throws a warning

  #91 opened 9 months ago by bardmaker
  1

• Question: same rsID but swapped alleles for A1 and A2 in bivariate analysis

  #92 opened 8 months ago by yunkaig
  0

• Issue on ${SLURM_ARRAY_TASK_ID}

  #74 opened 2 years ago by shenlan17
  2

• Tag/release v1.3 is missing

  #89 opened a year ago by espenhgn
  0

• mixer_figures.py combine: numpy.linalg.LinAlgError: singular matrix

  #58 opened 2 years ago by Huifang-Xu
  6

• Get rid of "no commercial use" statement

  #87 opened a year ago by espenhgn
  0

• Exclusion range(s)

  #88 opened a year ago by espenhgn
  0

• Minimum Requirements and Assessing Reliability of Estimates

  #85 opened a year ago by alterecho11
  0

• Questions on updating to version 1.3.0

  #67 opened 2 years ago by yyy-nkl
  2

• Install MiXeR failed

  #72 opened 2 years ago by Chloe-XiaoWu
  5

• Does MIXer analysis require coordination of positive and negative chains?

  #83 opened a year ago by Zhangzzzzzy
  0

• Error when running fit1.

  #82 opened a year ago by Zhangzzzzzy
  1

• Interpret bivariate -logLikelihood plot in Mixer 1.3

  #81 opened a year ago by CharleyXia
  0

• Initialisation of Library Issue

  #69 opened 2 years ago by alterecho11
  3

• The MIXER runs extremely slowly.

  #80 opened a year ago by shenlan17
  0

• Failure to generate certain plots

  #79 opened a year ago by kylechengtn
  0

• getting p-values for the overlap variants in the venn diagram

  #78 opened a year ago by ruthchia
  0

• How to get the list of SNPs identified to be shared between two traits?

  #77 opened a year ago by changxuling
  0

• try to fit `fit1` model, be killed

  #76 opened a year ago by llalluan
  1

• Problem visualising results

  #75 opened 2 years ago by jmkyang
  2

• Install Mixer failed

  #73 opened 2 years ago by shenlan17
  1

• same trait1 inputs have different estimated number

  #70 opened 2 years ago by chenyangjjj
  0

• Not getting any SNPs to tag?

  #68 opened 2 years ago by prabhjyotsaini
  0

• OSError: libbgmg.so after RuntimeWarning

  #66 opened 2 years ago by tobiaswolfram
  10

• Download 1000G.EUR.QC.prune_maf0p05_rand2M_r2p8.repNN.snps

  #65 opened 2 years ago by zqsha
  1

• Univariate visualization

  #64 opened 2 years ago by yyy-nkl
  2

• The link to download .ld and .snp files no longer exists

  #63 opened 2 years ago by yyy-nkl
  4

• CDLL ('c_functions_lin.so') file not found error

  #61 opened 2 years ago by Charxil
  0

• Standard errors were larger than effective numbers

  #60 opened 2 years ago by wuyong0103
  2

• Aborted (core dumped)

  #59 opened 2 years ago by humanpaingeneticslab
  1

• question about 22 chromosomes.

  #57 opened 3 years ago by ThisHq
  0

• Unstable MiXeR Results

  #55 opened 3 years ago by nasser1el
  0

• Runtime error: unexpected header error

  #54 opened 3 years ago by zillurbmb51
  2

• Error on mixer_figures.py

  #53 opened 3 years ago by jcabanad
  0

• combine creates files even when all replications are not present

  #52 opened 3 years ago by Mary-mufford
  0

• Segmentation Fault (core dumped ) error

  #51 opened 3 years ago by nenduru1
  1

• some problems for generating 1000G.EUR.QC.prune_maf0p05_rand2M_r2p8.repNN.snps in DATA PREPARATION

  #50 opened 3 years ago by showers14
  3