protocaller/ProtoCaller

BioSimSpace module cannot be imoprted in 1.1.2

Closed this issue · 3 comments

kexul commented

Since pypdb was broken, I switch to 1.1.2 as the README suggested. But I cannot import protocaller any more. The error shows that ImportError: BioSimSpace module cannot be imported

This is very likely a conda problem, so I would advice you to install ProtoCaller in its own empty environment created with python=3.7. I have also noticed that the resolution times can be incredibly slow, so you might benefit from installing it using mamba instead.

kexul commented

I did install protocaller in a clean new environment with python3.7. I reinstalled it again and again, no help.

kexul commented

I switch to the default installation method use conda install -c conda-forge -c omnia -c michellab -c essexlab protocaller since you said you've updated the conda package. Now everything works. Thanks for your quick reply and fix.