psadil
data scientist | research associate | research software engineer
Johns Hopkins Bloomberg School of Public HealthBaltimore, MD
Pinned Repositories
actions_test
aggregator_qc
agree
auto-volume-comparisons
ber
Boundary Extension with CFS analyses
cfs_recall
Testing for visual recollection of objects studied under CFS
classify
motion_fmri_survey
psadil
psadil's Repositories
psadil/motion_fmri_survey
psadil/psadil
psadil/actions_test
psadil/agree
psadil/auto-volume-comparisons
psadil/bids-pydantic
Pydantic model generator for BIDS metadata
psadil/biomarkers
psadil/cat12
psadil/brainageR_dockerfile
brainageR dockerfile
psadil/cv
psadil/dvars
psadil/fmriprep
fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
psadil/maps-2-models
psadil/mriqc
Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain
psadil/nilearn
Machine learning for NeuroImaging in Python
psadil/open_baltimore_baltimore-civic-project
We're working to improve Open Baltimore but we need feedback. This is code and direction for getting started
psadil/plink-docker
psadil/pymrimisc
psadil/python-vbr
Python library for working with Virtual Biospecimen Repository database
psadil/qsiprep
Preprocessing and reconstruction of diffusion MRI
psadil/qsiprep_build
Builds the dependencies for qsiprep
psadil/reorganizer
It was organized, but now do it differently
psadil/sdcflows
Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes
psadil/smriprep
Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
psadil/std2bids
psadil/tapis-symlink-archive-tester
psadil/trx-parquet
psadil/trx-python
Python implementation of the TRX file format
psadil/trx_benchmarks
psadil/ukbics