ragnorc
data scientist at Q Bio • 📈 probabilistic models & ML | 🌱 synthetic biology | 🧬 comp bio | 🚀 startups | languages 🌍
University of Cambridge / Francis Crick InstituteLondon
ragnorc's Stars
alexechu/protpardelle
microsoft/evodiff
Generation of protein sequences and evolutionary alignments via discrete diffusion models
OATML-Markslab/ProteinGym
Official repository for the ProteinGym benchmarks
agemagician/ProtTrans
ProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit and hundreds of Google TPUs using Transformers Models.
blackjax-devs/blackjax
BlackJAX is a Bayesian Inference library designed for ease of use, speed and modularity.
jessevig/bertviz
BertViz: Visualize Attention in NLP Models (BERT, GPT2, BART, etc.)
melobio/EvoPlay
noodle-run/noodle
Rethinking Student Productivity
rysana-ai/rysana-ai
The Rysana AI TS library.
NREL/EvoProtGrad
Directed evolution of proteins in sequence space with gradients
superfly/tokenizer
HTTP proxy that injects 3rd party credentials into requests
ollama/ollama
Get up and running with Llama 3.2, Mistral, Gemma 2, and other large language models.
dgretton/pyhamilton
Python for Hamilton liquid handling robots
magbak/chrontext
RosettaCommons/RFdiffusion
Code for running RFdiffusion
molstar/molstar
A comprehensive macromolecular library
Peldom/papers_for_protein_design_using_DL
List of papers about Proteins Design using Deep Learning
gcorso/DiffDock
Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking
smol-ai/developer
the first library to let you embed a developer agent in your own app!
salesforce/progen
Official release of the ProGen models
ekzhang/classes.wtf
A course catalog with extremely fast full-text search
lucia-auth/lucia
Authentication, simple and clean
karelklima/ldkit
LDkit - Linked Data query toolkit for TypeScript developers
KrishnaswamyLab/ReLSO-Guided-Generative-Protein-Design-using-Regularized-Transformers
a Transformer-based neural network for generating highly optimized protein sequences called Regularized Latent Space Optimization (RELSO)
pyro-ppl/numpyro
Probabilistic programming with NumPy powered by JAX for autograd and JIT compilation to GPU/TPU/CPU.
pingdotgg/uploadthing
File uploads for modern web devs
emilkowalski/sonner
An opinionated toast component for React.
yangkky/Machine-learning-for-proteins
Listing of papers about machine learning for proteins.
ShishirPatil/gorilla
Gorilla: Training and Evaluating LLMs for Function Calls (Tool Calls)
lintrule/lintrule
Let the LLM review your code.