Error in process_mutations step

[vermayugesh]

Hi I am running the 1st step process_mutations.py for the BRCA mutations from TCGA After installing all the requirements for this software it is showing this error. Any suggestions? Thanks

[matthewreyna]

Hello,

Please try the example in the wext/examples/simple folder. If the commands.sh script for this example runs correctly, then please compare your data and arguments for the process_mutations.py script with those in this example. From your error message, it is possible that you have unexpected (non-ASCII) characters in your data file.

Best,
Matt