Labeling most significant/highest log fold change?
theclairecamp opened this issue · 1 comments
theclairecamp commented
I was wondering if it is possible to label the values that are above a certain p-value and logfoldchange threshold with in the genenames parameter, instead of having to change the threshold within lfc_thr and pv_thr? Like by using indexes for tubles?
Thanks!
reneshbedre commented
Hi @theclairecamp ,
If you set genenames='deg'
, it will label all the points of up and down-regulated genes as defined by your threshold lfc_thr
and pv_thr
. See documentation at https://reneshbedre.github.io/blog/howtoinstall.html#volcano-plot
Let me know if it resolves your issue. Thank you for using bioinfokit for your work.