Some
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Echoloria commented
Some
mihem commented
Hi Echo,
this is not really the right place because this is about issues with CerebroApp developed by Roman.
Just contact me via mheming.de
But maybe this helps others.
I agree I also find SRA hard to work with.
If you just want the gene matrix why don't you just download these from GEO?
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE163005
Just download barcodes, matrix and genes (all samples aggregated by cellranger there) and in combination with my annotations, which you'll also find there, you should be able to select the samples that you want.
Hope this helps,
Mischko