appdirs issue
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I installed appdirs using pip (followed the installation guide), but ran into multiple errors.
`(base) steve@steve-VM:~/Documenten/bacsort_results$ download_genomes.sh Salmonella
Checking for Mash
/home/steve/anaconda3/bin/mash
Mash found!
Checking grep... good
Downloading genomes from Salmonella
Traceback (most recent call last):
File "/home/steve/Documenten/bacsort_results/ncbi-genome-download/ncbi-genome-download-runner.py", line 6, in
from ncbi_genome_download.main import main
File "/home/steve/Documenten/bacsort_results/ncbi-genome-download/ncbi_genome_download/init.py", line 6, in
from .core import (
File "/home/steve/Documenten/bacsort_results/ncbi-genome-download/ncbi_genome_download/core.py", line 4, in
from appdirs import user_cache_dir
ModuleNotFoundError: No module named 'appdirs'
find: ‘refseq/bacteria’: file or folder does not exist
No assemblies downloaded for Salmonella`