Tests failing
Opened this issue · 0 comments
mbhall88 commented
Hey @rrwick ,
I just tried running the tests and some of them failed.
The version of python I was running on is 3.5.2
I ran tests with python3 -m unittest
from the project root directory.
In total 7 tests failed. All with the same message - an example is below:
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ERROR: test_find_all_fast5s_verbose (tests.test_load_fast5s.TestLoadFast5s)
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Traceback (most recent call last):
File "/root/Deepbinner/tests/test_load_fast5s.py", line 37, in test_find_all_fast5s_verbose
fast5s = deepbinner.load_fast5s.find_all_fast5s(self.fast5_dir, verbose=True)
File "/root/Deepbinner/deepbinner/load_fast5s.py", line 57, in find_all_fast5s
for dir_name, _, filenames in os.walk(directory):
File "/usr/lib/python3.5/os.py", line 371, in walk
scandir_it = scandir(top)
TypeError: scandir: illegal type for path parameter
Seems maybe os.scandir
doesn't take a pathlib.Path
object in python 3.5 maybe?