LSK-109 data

Question

LSK-109 data

Opened this issue 5 years ago · 5 comments

Hi Ryan,

We have a couple of flow cells worth of reads with LSK-109 kit, and would be happy to share them with you. They are from the C. elegans genome. Let me know if you are still interested.
Best,

Jenny

Answer 1 · 2019-05-16T09:12:35.000Z

Hi Ryan,

I have under my elbow some runs on SQK-LSK109 with E.Coli and K.pneumoniae species.
In same way, theses data can maybe shared for you training model.

Best,

Answer 2 · 2019-07-01T11:56:08.000Z

Likewise - we have 11 flowcells worth of data here - LSK109 barcoded 1-24

Answer 3 · 2022-03-06T14:54:19.000Z

Hi,
I would also be very interested in a model trained on barcoded LSK109 data! Please let me know if such a model exists.
Best,

Answer 4 · 2022-07-11T14:39:47.000Z

Hi @jsemple19 @Nilad @SRooke,
I am looking for a complete LSK109 data set in order to train an LSK109 model for Deepbinner. I have the computational resources and know-how, but I do not have a complete data set. Are any of datasets mentioned in the previous comments publicly available or are you able to share?

Answer 5 · 2022-07-13T12:22:21.000Z

@jrhendrix
No dataset mentionned above are freely available.
It can be available in collaboration work.