segfault when using rasterize with `cover = TRUE` and `by`
Closed this issue · 1 comments
johnbaums commented
When using cover = TRUE and passing the by arg to rasterize, segfault occurs.
library(terra)
#> terra 1.7.79
gdal(lib="all")
#> gdal proj geos
#> "3.8.5" "9.4.0" "3.12.1"
f <- system.file("ex/lux.shp", package = "terra")
v <- vect(f)
r <- rast(v, ncols = 75, nrows = 100)
z <- rasterize(v, r, cover = TRUE, by = "ID_2")
*** caught segfault ***
address 0x0, cause 'memory not mapped'
Traceback:
1: .External(list(name = "CppMethod__invoke_notvoid", address = <pointer: 0x60000053f460>, dll = list(name = "Rcpp", path = "/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library/Rcpp/libs/Rcpp.so", dynamicLookup = TRUE, handle = <pointer: 0x7ff91bb5b1c0>, info = <pointer: 0x6000021307e0>), numParameters = -1L), <pointer: 0x600003902400>, <pointer: 0x60000053ada0>, .pointer, ...)
2: x@ptr$split(f)
3: methods::.hasSlot(x, "ptr")
4: messages(x@ptr$split(f), "split")
5: .local(x, f, ...)
6: split(x, by)
7: split(x, by)
8: .local(x, y, ...)
9: rasterize(v, r, cover = TRUE, by = "ID_2")
10: rasterize(v, r, cover = TRUE, by = "ID_2")
Possible actions:
1: abort (with core dump, if enabled)
2: normal R exit
3: exit R without saving workspace
4: exit R saving workspaceCreated on 2024-06-19 with reprex v2.0.2
Session info
sessioninfo::session_info()
#> ─ Session info ───────────────────────────────────────────────────────────────
#> setting value
#> version R version 4.3.2 (2023-10-31)
#> os macOS Ventura 13.6.7
#> system x86_64, darwin20
#> ui X11
#> language (EN)
#> collate en_AU.UTF-8
#> ctype en_AU.UTF-8
#> tz Australia/Melbourne
#> date 2024-06-19
#> pandoc 2.14.2 @ /usr/local/bin/ (via rmarkdown)
#>
#> ─ Packages ───────────────────────────────────────────────────────────────────
#> package * version date (UTC) lib source
#> cli 3.6.2 2023-12-11 [1] CRAN (R 4.3.0)
#> codetools 0.2-19 2023-02-01 [1] CRAN (R 4.3.2)
#> digest 0.6.35 2024-03-11 [1] CRAN (R 4.3.2)
#> evaluate 0.23 2023-11-01 [1] CRAN (R 4.3.0)
#> fastmap 1.2.0 2024-05-15 [1] CRAN (R 4.3.3)
#> fs 1.6.4 2024-04-25 [1] CRAN (R 4.3.2)
#> glue 1.7.0 2024-01-09 [1] CRAN (R 4.3.0)
#> htmltools 0.5.8.1 2024-04-04 [1] CRAN (R 4.3.2)
#> knitr 1.45 2023-10-30 [1] CRAN (R 4.3.0)
#> lifecycle 1.0.4 2023-11-07 [1] CRAN (R 4.3.0)
#> magrittr 2.0.3 2022-03-30 [1] CRAN (R 4.3.0)
#> purrr 1.0.2 2023-08-10 [1] CRAN (R 4.3.0)
#> R.cache 0.16.0 2022-07-21 [1] CRAN (R 4.3.0)
#> R.methodsS3 1.8.2 2022-06-13 [1] CRAN (R 4.3.0)
#> R.oo 1.26.0 2024-01-24 [1] CRAN (R 4.3.2)
#> R.utils 2.12.3 2023-11-18 [1] CRAN (R 4.3.0)
#> Rcpp 1.0.12 2024-01-09 [1] CRAN (R 4.3.0)
#> reprex 2.0.2 2022-08-17 [1] CRAN (R 4.3.0)
#> rlang 1.1.3 2024-01-10 [1] CRAN (R 4.3.0)
#> rmarkdown 2.26 2024-03-05 [1] CRAN (R 4.3.2)
#> sessioninfo 1.2.2 2021-12-06 [1] CRAN (R 4.3.0)
#> styler 1.10.2 2023-08-29 [1] CRAN (R 4.3.0)
#> terra * 1.7-79 2024-05-27 [1] Github (rspatial/terra@fe50dec)
#> vctrs 0.6.5 2023-12-01 [1] RSPM (R 4.3.0)
#> withr 3.0.0 2024-01-16 [1] CRAN (R 4.3.0)
#> xfun 0.44 2024-05-15 [1] CRAN (R 4.3.3)
#> yaml 2.3.8 2023-12-11 [1] CRAN (R 4.3.0)
#>
#> [1] /Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library
#>
#> ──────────────────────────────────────────────────────────────────────────────