ruthkr/deepredeff

Potential bug: Why deepredeff does pick other T systems like T1/2/4/6 and pedicted them as T3 effector

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Dear Ruth,

I am running deepedeff on isolated strains looking for potential T3 effectors, but to my surprise it picks also other effectors such Type I/II etc. Why it behaves in this way? It does seem as if no blasting is done which is not the case based on your paper. Is this a kind of bug in your software or could be something else? I have noticed also with cut-off value of 0.5 some T3 effectors are left out as well.

Thanks