saezlab/liana

Any domcuments for CCC method developers?

shenscore opened this issue · 1 comments

shenscore commented

In other word, is there anyway to benchmark a new CCC method by using LIANA?

dbdimitrov commented

Hi @shenscore,

Likely the easiest way would be via the OpenProblems repo, where we reproduced and extended the benchmark described in the liana manuscript:
https://github.com/openproblems-bio/openproblems/tree/main/openproblems/tasks/_cell_cell_communication

Hope this helps :)