Would you mind releasing scripts related to cell cycle score?
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wangyiqing50 commented
Hi, I am reading the paper and find it a very informative manuscript.
I was wondering if I can check the code on how exactly the cell cycle score was calculated.
roramirezf commented
Sorry for the delay,
I have added the missing script here: https://github.com/saezlab/visium_heart/blob/master/st_snRNAseq/02_snuc_integration_harmony/estimate_cellcycle.R
It is based on Seurat's annotation.
Cheers