Error while regenerating alignment data

Question

Error while regenerating alignment data

Opened this issue 2 years ago · 1 comments

Decompression of paired-ended reads is replacing the read names. This should not happen since for paired-ended data read names are already stored in the compressed files and should be picked up during decompression

Answer 1 · 2022-09-08T05:08:55.000Z

For some reason, ABRIDGE is calling the decompression program for SE instead of PE. The presence of the dictionary check is failing