Pinned Repositories
bamreadcountr
wrapper and parser for bam readcount
bioreadr
Adding all readers of genomic tools
funr
Simple Utility providing Shell Access to all R Functions
params
Simplify parameters
polysolver
readthedocs
Create readthedocs website for a R package
RvsPython
A repo comparing syntax in R and Python for various tasks. Not comprehensive, but a subset of lines to get one started
sahilseth's Repositories
sahilseth/funr
Simple Utility providing Shell Access to all R Functions
sahilseth/RvsPython
A repo comparing syntax in R and Python for various tasks. Not comprehensive, but a subset of lines to get one started
sahilseth/bamreadcountr
wrapper and parser for bam readcount
sahilseth/params
Simplify parameters
sahilseth/bioreadr
Adding all readers of genomic tools
sahilseth/polysolver
sahilseth/bioliners
bioinformatics oneliners
sahilseth/comut
sahilseth/ConsensusTME
ConsensusTME Gene Sets and R Script
sahilseth/containerrr
Singularity container R for HPC environments
sahilseth/covid-home-care-app
sahilseth/dnaseq_analysis
Packages, tips etc for analysis of WEX/WGS/Amplicon sequencing data
sahilseth/example-rmd-templates
A selection of minimal templates used to highlight R Markdown templates, as referred to in the "R Markdown Definitive Guide"
sahilseth/firebase
Authenticate Shiny Users with Firebase
sahilseth/genomic_datasets
R packages for various bioinformatics analysis
sahilseth/gganimate_df
sahilseth/immunedeconv
A unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter)
sahilseth/MultiAssayExperiment
Bioconductor package for management of multi-assay data
sahilseth/myplots
sahilseth/omics
sahilseth/phylowgs
Application for inferring subclonal composition and evolution from whole-genome sequencing data.
sahilseth/PureCN
Copy number calling and variant classification using targeted short read sequencing
sahilseth/r_stats_and_plots
sahilseth/rocker
Rocker and related NGS containers
sahilseth/sahilseth.github.io
Tidbits from hacking and wrangling
sahilseth/shiny-google-auth
sahilseth/statistics
sahilseth/vbox_cheatsheet
cheatsheet for vboxmanage
sahilseth/vcfR
Tools to work with variant call format files
sahilseth/wranglr