satijalab/azimuth

Issues

• Error when using the web app for PBMC annotation

  #206 opened 8 months ago by aaronejaime
  5

• Error at 'error in evaluating the argument 'x' in selecting a method for function 't': non-conformable arrays'

  #200 opened 9 months ago by shivUSF
  5

• Error 'could not find function "Key<-"' when using docker

  #195 opened 9 months ago by qianxuans
  2

• data privacy running Azimuth website App

  #233 opened 2 months ago by BanafshehKhaki
  0

• Azimuth:::ConvertEnsembleToSymbol error, "...y$ensembl_gene_id` is a <logical>."

  #232 opened 3 months ago by winner0809
  0

• Clarification in the PBMC reference (SeuratData vs Zenodo vs Azimuth website)

  #231 opened 3 months ago by batalha23
  0

• Error installing Azimuth

  #230 opened 3 months ago by gilstel
  0

• Seurat v5 not compatible with Azimuth

  #229 opened 3 months ago by chunjie-sam-liu
  0

• Issue while running RunAzimuth function on my own reference created using Azimuthreference

  #228 opened 3 months ago by sadhanagaddam3
  0

• Error installing Azimuth with Rtools

  #227 opened 3 months ago by ElisaRosatiScalchi
  2

• ERROR: dependencies ‘glmGamPoi’, ‘TFBSTools’ are not available for package ‘Azimuth’

  #226 opened 3 months ago by GRT-coder
  0

• Errors When Uploading and Running Dataset on Web Application and Locally

  #225 opened 4 months ago by macelik
  0

• Error in installing package

  #191 opened 10 months ago by czfoo
  4

• Azimuth compatibility with R version

  #224 opened 5 months ago by npirete
  0

• Azimuth installation problem

  #221 opened 5 months ago by bebejhun
  2

• Kidney reference zenodo

  #223 opened 5 months ago by KalinNonchev
  2

• RunAzimuth offline with homolog.table path reference

  #217 opened 6 months ago by KalinNonchev
  3

• Error in curl::curl_fetch_memory(url, handle = handle)

  #180 opened 5 months ago by Cathy94
  1

• Error in curl::curl_fetch_memory(url, handle = handle)

  #179 opened 5 months ago by Cathy94
  2

• Azimuth and integrated data

  #210 opened 5 months ago by tirk999
  1

• object 'mtx.shape' not found ERROR Azimuth web app

  #215 opened 5 months ago by anastamag
  2

• Reproducibility

  #213 opened 5 months ago by pwmellors
  2

• Gene ID conversions

  #222 opened 5 months ago by annaborchers
  0

• ConvertEnsembleToSymbol

  #204 opened 8 months ago by GischD
  2

• Bug in `AzimuthReference`

  #219 opened 6 months ago by zacharyrs
  1

• `fv.size() != vector_size`

  #220 opened 6 months ago by zacharyrs
  0

• Getting error in RunAzimuth function with "bonemarrowref" reference on Seurat object

  #216 opened 6 months ago by JainRit
  0

• LoadH5ADobs Missing Labels

  #214 opened 6 months ago by sylvia-science
  0

• Error Installing Azimuth

  #212 opened 7 months ago by NicoHadas
  0

• Error in indices.ba

  #199 opened 9 months ago by jcorn427
  1

• Docker image tag says "v0.5.0" but sessionInfo() inside the container returns "Azimuth_0.4.6"

  #209 opened 7 months ago by sinanassiri
  1

• RunAzimuth ATAC working for BMMC but not for PBMC atlas

  #211 opened 7 months ago by rauldiul
  0

• AzimuthReference fails when metadata field contains empty factor levels

  #208 opened 8 months ago by erzakiev
  0

• AzimuthReference error: refAssay (SCT) should contain a single SCT model

  #207 opened 8 months ago by erzakiev
  0

• "SCT is not an assay present in the given object" even though it is present

  #183 opened a year ago by viktorfeketa
  3

• Is there a way to find out which reference genes drive the cell type prediction score?

  #205 opened 8 months ago by dgoekbuget
  1

• Error in eval(predvars, data, env) : object 'log_umi' not found

  #194 opened 10 months ago by Tycooner
  3

• Azimuth and Signac error

  #202 opened 8 months ago by nitinmahajan20
  2

• Azimuth UMAP result is not consistent with Seurat

  #201 opened 8 months ago by tewengtong
  2

• RunAzimuth not working with SCT assay

  #203 opened 8 months ago by anoop1988
  1

• Markers listed in Azimuth for human tonsil are incorrect and in conflict with original preprint?

  #198 opened 9 months ago by denvercal1234GitHub
  0

• changing `k.weight` in RunAzimuth seems does not allow workaround error in FindWeights

  #197 opened 9 months ago by mkazanov
  0

• Error in .local(x, na.rm, dims, ...) : object 'CRsparse_colSums' not found error from RunAzimuth()

  #192 opened 10 months ago by annstrange
  8

• Compatibility between azimuth with seurat v4

  #193 opened 10 months ago by Montsecb
  3

• error with install azimuth

  #187 opened 10 months ago by turuilin
  6

• Missing a parenthesis in the installation code

  #190 opened 10 months ago by pedrodcb
  0

• No feature overlap between existing object and new layer data

  #186 opened a year ago by mainyanghr
  0

• Other species than human and mouse

  #182 opened a year ago by viktorfeketa
  0

• Error in installing Azimuth

  #181 opened a year ago by dzhao98
  2

• RunAzimuth error, Error in `.rowNamesDF<-`(x, value = value) : duplicate 'row.names' are not allowed

  #178 opened a year ago by Cathy94
  2