longer processing time for large genome?
bijendrabio opened this issue · 1 comments
bijendrabio commented
Hello,
The Syri is taking a significantly longer time during the 'INFO - mapstar:48 - Identifying Inversions' step. The input aligned genomes are each 700Mb in size. Do you have any suggestions as to why it is taking longer to process?
Regards,
B
mnshgl0110 commented
This could happen if there are very large inversions. Try using a smaller value for --invgaplen.