math domain error
Closed this issue · 3 comments
ding00 commented
when I was computing the DTF, I got an error : ValueError: math domain error
here is the traceback:
Traceback (most recent call last):
File "/Users/wisejoker/Desktop/dingling/techniques/code/epilepsy_auxiliary_system/localization/dtf.py", line 70, in <module>
compute_dtf(data_rootpath, patient_onset_path, save_root)
File "/Users/wisejoker/Desktop/dingling/techniques/code/epilepsy_auxiliary_system/localization/dtf.py", line 57, in compute_dtf
ws.do_mvarica()
File "/Users/wisejoker/miniconda3/envs/py39pytorch/lib/python3.9/site-packages/scot/ooapi.py", line 226, in do_mvarica
result = mvarica(x=self.data_[self.trial_mask_, :, :], cl=self.cl_[self.trial_mask_], var=self.var_,
File "/Users/wisejoker/miniconda3/envs/py39pytorch/lib/python3.9/site-packages/scot/varica.py", line 113, in mvarica
mx, ux = backend['ica'](cat_trials(r))
File "/Users/wisejoker/miniconda3/envs/py39pytorch/lib/python3.9/site-packages/scot/backend_builtin.py", line 23, in wrapper_infomax
u = infomax(datatools.cat_trials(data).T).T
File "/Users/wisejoker/miniconda3/envs/py39pytorch/lib/python3.9/site-packages/scot/external/infomax_.py", line 245, in infomax
angledelta = math.acos(np.sum(delta * olddelta) /
ValueError: math domain error
cbrnr commented
This error occurs during ICA decomposition, which is taken from an external package (MNE). It would be helpful if you could debug and see what e.g. datatools.cat_trials(data).T
looks like. You could store that array and then test it directly with the external Infomax function.
ding00 commented
I replaced the infomax() from the newest version of mne, it works, thank you!
cbrnr commented
Perfect, thanks for letting us know! We should also update it with the latest version.