seanli-china

seanli-china's Stars

• buzsakilab/buzcode

  Code for internal lab sharing - polishing has started but is by no means complete

  Language:MATLAB123132

• sccn/SIFT

  SIFT is an EEGLAB-compatible toolbox for analysis and visualization of multivariate causality and information flow between sources of electrophysiological (EEG/ECoG/MEG) activity. It consists of a suite of command-line functions with an integrated Graphical User Interface for easy access to multiple features. There are currently six modules: data preprocessing, model fitting and connectivity estimation, statistical analysis, visualization, group analysis, and neuronal data simulation.

  Language:MATLAB345

• preraulab/multitaper_toolbox

  A multitaper spectral estimation toolbox implemented in Matlab, Python, and R

  Language:Python6424

• canlab/MediationToolbox

  Single-level and multi-level mediation analyses for any kind of data, with bootstrap-based significance testing. Neuroimaging-oriented functions allow for mediation effect parametric mapping (mapping of mediation effects across the brain) and multivariate mediation.

  Language:HTML8529

• mickcrosse/PERMUTOOLS

  A MATLAB package for multivariate permutation testing and effect size measurement

  Language:MATLAB192

• voytekresearch/EISlope

  Analysis code used to create figures in Gao et al., 2017

  Language:Matlab155

• beteje/LFP_Analysis

  MATLAB code for local field potential analysis

  Language:Matlab183

• LNDG/mMSE

  Code & short tutorial for modified multi-scale entropy analysis

  Language:Jupyter Notebook218

• robbystk/emg

  matlab functions for processing electromyography signals

  Language:MATLAB4015

• SacklerCentre/MVGC2

  The MVGC Multivariate Granger Causality toolbox (Version 2) for Granger-causal inference from time-series data. CURRENTLY IN EARLY DEVELOPMENT - UNTESTED!

  Language:MATLAB227

• MengYunWang/Granger-Causality-Analysis

  Using GC analysis to explore the effective connectivities

  Language:MATLAB167

• asymppdc/asympPDC

  The asympPDC Package is a MATLAB and Octave package for Partial Directed Coherence (PDC) and Directed Transfer Function (DTF) estimation with asymptotic statistics, allied functions and routines for Granger Causality Test and results pretty plotting.

  Language:MATLAB184

• fooof-tools/fooof

  Parameterizing neural power spectra into periodic & aperiodic components.

  Language:Python368100

• atpoulsen/Microstate-EEGlab-toolbox

  Microstate EEGlab toolbox

  Language:MATLAB4719

• otoolej/qEEG_feature_set

  NEURAL: a neonatal EEG feature set in Matlab

  Language:MATLAB3723

• mateusjoffily/EDA

  Toolbox for Electrodermal Activity (EDA) preprocessing and analysis

  Language:MATLAB1710

• crisglav/discover-eeg

  A pipeline to automatically preprocess, analyze and visualize resting state EEG data.

  Language:MATLAB487

• TuziUsagi/burstAnalysis

  Language:Matlab11

• marderlab/Drosophila-larvae

  Code to analyze spiking activity of drosophila larval motoneurons

  Language:Jupyter Notebook1

• pmknutsen/spiky

  Automated Spike Sorting for Matlab

  Language:Matlab64

• hangyabalazs/Hangya-Matlab-code

  Matlab code for analysis of neural data

  Language:Matlab51

• KordingLab/Neural_Decoding

  A python package that includes many methods for decoding neural activity

  Language:Jupyter Notebook436121

• open-ephys/analysis-tools

  Archived code for reading data saved by the Open Ephys GUI

  Language:MATLAB59176

• adredish/MClust-Spike-Sorting-Toolbox

  MClust is a Matlab-based spike sorting toolbox for the separation of putative cells from multi-site neurophysiological recordings. It is particularly good for tetrodes.

  Language:MATLAB1411

• rly/simple-mua-detection

  MATLAB script to detect spikes in high-pass filtered ephys data (Plexon PL2 format) using adaptive amplitude thresholding

  Language:MATLAB51

• kwikteam/klusta

  Automatic spike sorting up to 64 channels

  Language:Python5341

• LFPy/LFPy

  Python-module for calculation of extracellular potentials from multicompartment neuron models and networks

  Language:Python7845

• LimHyungTae/paper_quality_plot.matlab

  paper_quality_plot.matlab

  Language:MATLAB5614

• SacklerCentre/MVGC1

  The MVGC Multivariate Granger Causality toolbox for Granger-causal inference from time-series data.

  Language:MATLAB4825

• trentool/TRENTOOL3

  Open-Source MATLAB toolbox for transfer entropy estimation

  Language:Matlab6026