sestaton/HMMER2GO

Issues

• installation error

  #31 opened 2 years ago by amoltej
  1

• Conda Install

  #24 opened 4 years ago by JChristopherEllis
  9

• BioPerl dependency

  #30 opened 2 years ago by fdchevalier
  1

• map2gaf problem

  #26 opened 4 years ago by Estevelag
  11

• Don't you have precomplied libraries

  #29 opened 3 years ago by sunnyEV
  0

• Add GO terms to GFF3 file

  #27 opened 3 years ago by sestaton
  0

• Unable to Connect to ftp.geneontology.org

  #25 opened 3 years ago by Wolves-printer
  4

• Installation

  #21 opened 5 years ago by JChristopherEllis
  3

• small changes to the Demostration script

  #18 opened 4 years ago by glucksfall
  2

• Update mapping file location

  #20 opened 4 years ago by sestaton
  1

• can't fetch files from ftp.geneontology.org

  #10 opened 4 years ago by cwzkevin
  27

• -nm option

  #22 opened 4 years ago by swiddison
  3

• obo file and the association file out of sync?

  #23 opened 4 years ago by IanCodes
  5

• HMM file b

  #19 opened 6 years ago by zijiangyang
  2

• Custom e-value threshold during mapping procedure

  #17 opened 6 years ago by matveykolesnik
  1

• Program lookup in the PATH is reversed

  #16 opened 6 years ago by pbordron
  1

• Issue with getorf command

  #15 opened 6 years ago by LorenaDerezanin
  2

• Error with Emboss identifiers

  #7 opened 9 years ago by jirivorel
  27

• Can't use string as a SCALAR ref

  #14 opened 7 years ago by magadancito
  0

• number of final terms

  #13 opened 7 years ago by kbrevs
  3

• Unrecognized command: pfam2go

  #12 opened 7 years ago by mhalagan
  1

• make test errors

  #11 opened 8 years ago by kbrevs
  3

• Add required output file argument to 'run' command

  #9 opened 8 years ago by sestaton
  0

• For hmmer2go getorf, warn if two or ORFs of the maximum length are found

  #8 opened 9 years ago by sestaton
  0

• make test errors

  #6 opened 9 years ago by MDSharma
  1

• Add option to 'run' subcommand to execute blastx

  #5 opened 9 years ago by sestaton
  0

• Add support for compressed files

  #3 opened 10 years ago by sestaton
  1

• can't use implicit split in mapterms with Perl 5.10.1

  #4 opened 10 years ago by sestaton
  1

• Add benchmarks

  #2 opened 10 years ago by sestaton
  0

• Using transdecoder instead of getorf

  #1 opened 10 years ago by alexharkess
  6