/abc-sysbio

Fork of ABC-SysBio: A tool for parameter inference and model selection

Primary LanguagePython

abc-sysbio

A fork of ABC-SysBio, version 2.08, a package for Approximate Bayesian Computation in Python.

From the developers: "abc-sysbio implements likelihood free parameter inference and model selection in dynamical systems. It is designed to work with both stochastic and deterministic models written in python or Systems Biology Markup Language (SBML). abc-sysbio combines three algorithms: ABC rejection sampler, ABC SMC for parameter inference and ABC SMC for model selection."

Installation instructions for Linux and MacOSX 10.8 can be found in README.txt

There original package can be downloaded here. Additional documentation is available on the website for the Theoretical Systems Biology group at Imperial College London. A paper on the package is also available here.