SpikeInterface
A unified framework for spike sorting. Paper at: https://elifesciences.org/articles/61834
Pinned Repositories
MEArec
Fast and customizable of extracellular recordings on MEA
probeinterface
Python package to handle probe layout, geometry and wiring to device.
probeinterface_library
Collection of probe description for probeinterface
spikeextractors
Python-based module for extracting from, converting between, and interfacing with many common file formats in extracellular recording.
spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
spikeinterface-dockerfiles
Collection of spike sorters Docker files
spikeinterface-gui
GUI for spikeinterface objects
spikesorters
Python-based module with spike sorter wrappers and a simple API for running them.
spiketoolkit
Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.
spiketutorials
Tutorials for using SpikeInterface on extracellular datasets.
SpikeInterface's Repositories
SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
SpikeInterface/spikeextractors
Python-based module for extracting from, converting between, and interfacing with many common file formats in extracellular recording.
SpikeInterface/spiketutorials
Tutorials for using SpikeInterface on extracellular datasets.
SpikeInterface/probeinterface
Python package to handle probe layout, geometry and wiring to device.
SpikeInterface/spiketoolkit
Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.
SpikeInterface/MEArec
Fast and customizable of extracellular recordings on MEA
SpikeInterface/spikeinterface-gui
GUI for spikeinterface objects
SpikeInterface/spikesorters
Python-based module with spike sorter wrappers and a simple API for running them.
SpikeInterface/spikely
A GUI for running popular spike sorting algorithms on extracellular data of any file format.
SpikeInterface/spikemetrics
Metrics for spike sorting validation/quality control
SpikeInterface/probeinterface_library
Collection of probe description for probeinterface
SpikeInterface/spikeinterface-dockerfiles
Collection of spike sorters Docker files
SpikeInterface/spikewidgets
Python-based widgets for spike sorting and electrophysiology.
SpikeInterface/spikecomparison
Python-based modules to compare and benchmark spike sorting results.
SpikeInterface/SpikeInterface-Hackathon-Edinburgh-May24
Repo for SpikeInterface Hackathon in Edinburgh - May24
SpikeInterface/spikeinterface-pipelines
Collection of standardized analysis pipelines based on SpikeInterface
SpikeInterface/spikeresults
A collection of notebooks with results obtained with the help of SpikeInterface
SpikeInterface/ndx-probeinterface
Extension for neural probes in the probeinterface format to NWB
SpikeInterface/spikeinterface-events
Material for courses, conferences, and events about SpikeInterface
SpikeInterface/SpikeInterface-Training-Edinburgh-May24
Material for user training day of SpikeInterface
SpikeInterface/SpikeInterface.github.io
spikeinterface report
SpikeInterface/hybrid_template_library
Library of templates to create hybrid data for spike sorting benchmarks
SpikeInterface/spikefeatures
Feature extraction library for extracellular waveforms
SpikeInterface/spikeinterface-airspeed-velocity-benchmarks
Benchmark SpikeInterface performance with Airflow
SpikeInterface/spikeinterface-kilosort-components
This is a friendly fork of some of kilosort4 algos