Pinned Repositories
brat
brat rapid annotation tool (brat) - for all your textual annotation needs
annodoc
Annodoc annotation documentation support system
conlleval.py
Python version of the evaluation script from CoNLL'00-
conllu.js
CoNLL-U format library for JavaScript
ncbi-disease
NCBI disease corpus - related resources
nxml2txt
NLM .nxml to text format conversion
standoff2conll
Conversion from brat-flavored standoff to CoNLL format
wiki-bert-pipeline
Generate BERT vocabularies and pretraining examples from Wikipedias
wvlib
word vector library
docs
Universal Dependencies online documentation
spyysalo's Repositories
spyysalo/nxml2txt
NLM .nxml to text format conversion
spyysalo/conllu.py
CoNLL-U format library for Python
spyysalo/jnlpba
Tools and resources related to the JNLPBA corpus
spyysalo/bionlp_st_2011_supporting
Supporting resources and a replicable pipeline for the BioNLP Shared Task 2011 data
spyysalo/standoff2pa
Conversion from brat-flavored standoff to PubAnnotation format
spyysalo/corpora
Repo mostly for issues in corpora I'm involved with, also maybe some corpus data at some point.
spyysalo/keras
Deep Learning library for Python. Convnets, recurrent neural networks, and more. Runs on Theano and TensorFlow.
spyysalo/ptb2conll
Convert PTB format into simple CoNLL-like format
spyysalo/pubannotation.py
Python library for PubAnnotation
spyysalo/restful-oa
RESTful Open Annotation
spyysalo/annodoc-demo
spyysalo/craft
Material relating to work on the CRAFT corpus.
spyysalo/crfsuite
CRFsuite: a fast implementation of Conditional Random Fields (CRFs)
spyysalo/hoccorpus
Tools for the Hallmarks of Cancer corpus
spyysalo/jekyll-hook
trigger jekyll deployment by github webhook event
spyysalo/knowtator2oa
spyysalo/nersuite
spyysalo/pmccite
Extract pretty-printed article citation from PMC .nxml file
spyysalo/ptb2oa
Convert Penn Treebank format into Open Annotation format.
spyysalo/pyhttp
Experiments with python HTTP server
spyysalo/textseg
Some text segmentation stuff
spyysalo/wsserver
WebSocket server test