Pinned Repositories
roslyn
The Roslyn .NET compiler provides C# and Visual Basic languages with rich code analysis APIs.
antibody-modelling-benchmark
Data repository for the comparison of RoseTTAFold, SWISS-MODEL and ABodyBuilder in antibody modelling from plain amino acid sequence.
jdock
An extended variant of idock which was originally developed by @HongjianLi.
mccs-bib-examples
MCCS (Molecular Complex Characterizing System) examples for papers published on BIB (Briefing in Bioinformatics)
mccs-docker
Docker image with the MCCS toolchain and all third-party software used in the MCCS protocol pre-configured and installed.
mccs-nprot-examples
This repository will host all MCCS (Molecular Complex Characterizing System) examples for NPROT (Nature Protocols)
mccs-toolchain
This repository contains all in-house command-line tools served in the MCCS protocol.
mccsx
A command line analysis tool for residue energy contribution vectors.
pdbget
A command line tool for fetching molecular PDB files and splitting protein chains.
video-hotkeys
Video Hotkeys is a browser extension that enables YouTube-like hotkey experience for video websites.
stcmz's Repositories
stcmz/jdock
An extended variant of idock which was originally developed by @HongjianLi.
stcmz/video-hotkeys
Video Hotkeys is a browser extension that enables YouTube-like hotkey experience for video websites.
stcmz/antibody-modelling-benchmark
Data repository for the comparison of RoseTTAFold, SWISS-MODEL and ABodyBuilder in antibody modelling from plain amino acid sequence.
stcmz/mccs-bib-examples
MCCS (Molecular Complex Characterizing System) examples for papers published on BIB (Briefing in Bioinformatics)
stcmz/mccs-nprot-examples
This repository will host all MCCS (Molecular Complex Characterizing System) examples for NPROT (Nature Protocols)
stcmz/pdbget
A command line tool for fetching molecular PDB files and splitting protein chains.
stcmz/mccs-toolchain
This repository contains all in-house command-line tools served in the MCCS protocol.
stcmz/mccsx
A command line analysis tool for residue energy contribution vectors.
stcmz/pdbm
A command line measurement tool for molecule models.
stcmz/pdbqtf
A command line tool for fixing problematic chemical elements in PDBQT files.
stcmz/gpcrn
A command line offline database for GPCR numbering.
stcmz/mccs-docker
Docker image with the MCCS toolchain and all third-party software used in the MCCS protocol pre-configured and installed.
stcmz/pdbrn
A command line tool for renumbering protein sequence in PDB/PDBQT molecular models.
stcmz/antibody-design-huj3
This repository contains the raw input, intermediate and output data involved in developing the advanced antibody design protocol for humanized J3.
stcmz/isab-bib-examples
IsAb example data for Antibodies D44.1 and Cemiplimab.
stcmz/mccs-example-covid19
MCCS (Molecular Complex Characterization System) example data for virtual screening in DrugBank drugs for the SARS-CoV-2 3CL structure.
stcmz/mccs-example-gpcr
MCCS (Molecular Complex Characterization System) example data for scoring and clustering GPCR crystal structures.
stcmz/mccs-jcim-protease
Experimental data of the study on characterizing the binding features of inhibitors and modulators in SARS-CoV-2 main protease using MCCS.
stcmz/Mozo.Fwob
This repository contains the library implementation of the Fixed-Width Ordered Binary (FWOB) file format.