stschiff/sequence-formats

Missing data file in sdist tarball for test suite

Closed this issue · 2 comments

Running the test suite for 1.5.1 on the Stackage build server, I see the error message:

Failures:

  test/SequenceFormats/PlinkSpec.hs:57:5:
  1) SequenceFormats.Plink.readFamFile should read a FAM file correctly
       uncaught exception: IOException of type NoSuchThing
       testDat/example.fam: openFile: does not exist (No such file or directory)

  To rerun use: --match "/SequenceFormats.Plink/readFamFile/should read a FAM file correctly/"

  test/SequenceFormats/PlinkSpec.hs:62:5:
  2) SequenceFormats.Plink.readBedFile should read genotypes correctly
       uncaught exception: IOException of type NoSuchThing
       testDat/example.plink.bed: openFile: does not exist (No such file or directory)

  To rerun use: --match "/SequenceFormats.Plink/readBedFile/should read genotypes correctly/"

Sorry, forgot to include the new test files into the cabal package. Fixed in 1.5.1.1. Should work now.

I sincerely hope you create these feedbacks automatically. It's an amazing service and I appreciate all the time that goes into curating stackage!

That's very kind, thank you! And thank you for the super quick fix.