theislab/sc-pert

Perturseq package

Opened this issue · 0 comments

Hi, Theis lab,
I am curious whether you will consider to launch a relatively comprehensive tutorial for gene perturbation analysis. I noticed that you incorporated some aspects in Single-cell best practices. However, in that section, I am not sure whether other functions have not been demo for pertpy package. In addition, will you consider to add Perturbseq (https://github.com/klarman-cell-observatory/perturbseq) package for more friendly use, since I cannot find Perturbseq package in conda. Thanks so much!
Best,
Huajun