thinng/GraphDTA

Cannot run pretrained models

Closed this issue · 1 comments

CuongVoThanh commented

Dear Mr.Thin,

I have got issues when running pretrained-models.

  • With model_GCNet_davis.model and model_GCNet_kiba.model, it returns mse and ci scores successfully but might be wrong values (GCNet_davis: ci = 0.651, mse = 1.274, GCNet_kiba: ci = 0,639, mse = 0.592)

  • With model_GINConvNet_davis.model and model_GCNet_kiba.model, it also returns mse and ci scores successfully but also might be wrong values (GINConvNet_davis: ci = 0.662, mse = 1.189, GINConvNet_kiba: ci = 0.648, mse = 0.608)

  • With other pretrained_models, it throws an error as the image below:
    image

image

Steps to reproduce:

python create_data.py
python predict_with_pretrained_model.py
CuongVoThanh commented

Duplicate with this issue below:
#5