thomas-maeder/popeye

Bug: reading outside of mummer_measure_length

JoshuaGreen opened this issue · 1 comments

When Popeye is run over

UndefinedBehaviorSanitizer issues complaints like

conditions/mummer.c:278:7: runtime error: index 2 out of bounds for type 'mummer_length_measurer_type[2]' (aka 'unsigned int (*[2])(void)')
    #0 0x55671babd80a in instrument_move_generator /home/joshua/clean/popeye/conditions/mummer.c:278:7
    #1 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #2 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #3 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #4 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #5 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #6 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #7 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #8 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #9 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #10 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #11 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #12 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #13 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #14 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #15 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #16 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #17 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #18 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #19 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #20 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #21 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #22 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #23 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #24 0x55671bc15744 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c:217:9
    #25 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #26 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #27 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #28 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #29 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #30 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #31 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #32 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #33 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #34 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #35 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #36 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #37 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #38 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #39 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #40 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #41 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #42 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #43 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #44 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #45 0x55671bc1678f in stip_traverse_structure_binary_operand1 /home/joshua/clean/popeye/stipulation/structure_traversal.c:326:3
    #46 0x55671bc16840 in stip_traverse_structure_children_binary /home/joshua/clean/popeye/stipulation/structure_traversal.c:358:3
    #47 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #48 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #49 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #50 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #51 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #52 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #53 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #54 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #55 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #56 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #57 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #58 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #59 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #60 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #61 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #62 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #63 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #64 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #65 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #66 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #67 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #68 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #69 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #70 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #71 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #72 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #73 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #74 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #75 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #76 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #77 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #78 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #79 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #80 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #81 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #82 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #83 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #84 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #85 0x55671bc158e7 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c:175:9
    #86 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #87 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #88 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #89 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #90 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #91 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #92 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #93 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #94 0x55671bc1678f in stip_traverse_structure_binary_operand1 /home/joshua/clean/popeye/stipulation/structure_traversal.c:326:3
    #95 0x55671bc16840 in stip_traverse_structure_children_binary /home/joshua/clean/popeye/stipulation/structure_traversal.c:358:3
    #96 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #97 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #98 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #99 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #100 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #101 0x55671bc16500 in stip_traverse_structure_next_branch /home/joshua/clean/popeye/stipulation/structure_traversal.c:269:5
    #102 0x55671bc16925 in stip_traverse_structure_conditional_pipe_tester /home/joshua/clean/popeye/stipulation/structure_traversal.c:448:3
    #103 0x55671bc17f8a in stip_traverse_structure_children_conditional_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c:463:3
    #104 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #105 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #106 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #107 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #108 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #109 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #110 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #111 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #112 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #113 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #114 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #115 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #116 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #117 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #118 0x55671bc16500 in stip_traverse_structure_next_branch /home/joshua/clean/popeye/stipulation/structure_traversal.c:269:5
    #119 0x55671bc16925 in stip_traverse_structure_conditional_pipe_tester /home/joshua/clean/popeye/stipulation/structure_traversal.c:448:3
    #120 0x55671bc17f8a in stip_traverse_structure_children_conditional_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c:463:3
    #121 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #122 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #123 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #124 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #125 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #126 0x55671bc167ff in stip_traverse_structure_binary_operand2 /home/joshua/clean/popeye/stipulation/structure_traversal.c:344:3
    #127 0x55671bc1684a in stip_traverse_structure_children_binary /home/joshua/clean/popeye/stipulation/structure_traversal.c:359:3
    #128 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #129 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #130 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #131 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #132 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #133 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #134 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #135 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #136 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #137 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #138 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #139 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #140 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #141 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #142 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #143 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #144 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #145 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #146 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #147 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #148 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #149 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #150 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #151 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #152 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #153 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #154 0x55671bc1678f in stip_traverse_structure_binary_operand1 /home/joshua/clean/popeye/stipulation/structure_traversal.c:326:3
    #155 0x55671bc16840 in stip_traverse_structure_children_binary /home/joshua/clean/popeye/stipulation/structure_traversal.c:358:3
    #156 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #157 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #158 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #159 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #160 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #161 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #162 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #163 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #164 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #165 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #166 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #167 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #168 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #169 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #170 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #171 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #172 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #173 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #174 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #175 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #176 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #177 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #178 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #179 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #180 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #181 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #182 0x55671bc16a79 in stip_traverse_structure_testing_pipe_tester /home/joshua/clean/popeye/stipulation/structure_traversal.c:488:5
    #183 0x55671bc17f6a in stip_traverse_structure_children_testing_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c:505:3
    #184 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #185 0x55671bc17d52 in stip_traverse_structure_children /home/joshua/clean/popeye/stipulation/structure_traversal.c:710:3
    #186 0x55671babde50 in spin_off_measuring_branch /home/joshua/clean/popeye/conditions/mummer.c:466:3
    #187 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #188 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #189 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #190 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #191 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #192 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #193 0x55671babd713 in instrument_move_generator /home/joshua/clean/popeye/conditions/mummer.c:307:3
    #194 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #195 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #196 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #197 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #198 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #199 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #200 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #201 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #202 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #203 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #204 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #205 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #206 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #207 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #208 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #209 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #210 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #211 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #212 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #213 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #214 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #215 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #216 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #217 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #218 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #219 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #220 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #221 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #222 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #223 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #224 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #225 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #226 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #227 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #228 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #229 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #230 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #231 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #232 0x55671bc1678f in stip_traverse_structure_binary_operand1 /home/joshua/clean/popeye/stipulation/structure_traversal.c:326:3
    #233 0x55671bc16840 in stip_traverse_structure_children_binary /home/joshua/clean/popeye/stipulation/structure_traversal.c:358:3
    #234 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #235 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #236 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #237 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #238 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #239 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #240 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #241 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #242 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #243 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #244 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #245 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #246 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5
    #247 0x55671bc15260 in stip_traverse_structure /home/joshua/clean/popeye/stipulation/structure_traversal.c:90:7
    #248 0x55671bc15a72 in stip_traverse_structure_children_pipe /home/joshua/clean/popeye/stipulation/structure_traversal.c
    #249 0x55671bc1549e in stip_structure_visit_slice /home/joshua/clean/popeye/stipulation/structure_traversal.c:44:5

SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior conditions/mummer.c:278:7 in

It's possible that the fix here is simply to increase the length of mummer_measure_length to nr_sides + 1 and initialize mummer_measure_length[nr_sides] to NULL, but I'm not sure. (On the other hand, that change can't really hurt.)

I dug into this a bit more.  At least for BEISPIEL/zwangsfeld.inp the issue comes when si == 1731, and SLICE_STARTER(1731) is last set to no_side on line 367 of stipulation/stipulation.c.  Why we're changing SLICE_STARTER((*copies)[si]) there after a successful Slice copy is beyond me, though that doesn't mean that it's wrong.