alpha-diversity
There are 13 repositories under alpha-diversity topic.
vallenderlab/MicrobiomeR
A comprehensive and customizable R package for microbiome analysis.
metagenopolis/ESKRIM
ESKRIM is a reference-free tool that compares microbial richness in shotgun metagenomic samples by counting k-mers
philippmuench/AIH_metagenome
code to reproduce AIH results
Brochado-Kith/microbiome_analysis
The following codes are focused on microbiome analysis, alpha, beta and relative abundance differences.
iliapopov17/The-shadow-of-HIV
🦠Research project in Bioinformatics Institute 2023-2024
Microbiome-Diversity-Inspector/Microbiome-Diversity-Inspector
Microbiome Diversity Inspector - A platform for visual analysis of microbiome data.
shivankurkapoor/microbiome-data-analysis
Microbiome Data Analysis
abarghi/Diversity_Using_Vegetarian_and_Tidyverse
Alpha, beta and gamma diversities are computed and visualized using formulas and using the R package vegetarian.
Ahmed-A-Mohamed/metaGEENOME
metaGEENOME is a 16S rRNA metagenomic analysis tool that encompasses nearly all steps of downstream analysis.
JTSALAH/Fish-Diversity-Ecology-Assessment
Take advantage of the adehabitat packages in R to determine ecological community richness: including alpha, beta, and gamma diversity!
PopovIILab/BatShotMetaFlow
🦇🧫📊Supplementary materials for study on bat gut shotgun metagenomics
gkeimiyake/homogeneiza-o-bi-tica
verificacao da homogeneidade biotica em bioma de restinga de mata atlantica atraves de testes de alfa e beta diversidade para riqueza e abundancia de especies