ambermd
There are 11 repositories under ambermd topic.
alanwilter/acpype
OFFICIAL: AnteChamber PYthon Parser interfacE
Amber-MD/pytraj
Python interface of cpptraj
CyberCatQ/pyCADD
A python package for computer-aid drug design.
cbouy/DashMD
Real time monitoring and visualization of Amber MD simulations
GilsonLabUCSD/Sensitivity-Analysis
a force field optimization tool
atn-journal/lemonpy
Tools for personal use. Feel free to use/modify.
hhg7/PDB_stacker
takes a time directory of PDB files and shows stacking percentage as a function of time
juvion/AmberFF_tRNA
Amber force field parameters (based on ff99) for tRNAs
mhriitm/mhriitm.github.io
This my personal website
SwaroopKunapuli/SGMVMOO
Stochastic Global Multi-Variable Multi-Objective Optimization