analysis-pipeline
There are 28 repositories under analysis-pipeline topic.
seandavi/awesome-single-cell
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
grailbio/reflow
A language and runtime for distributed, incremental data processing in the cloud
tonyfischetti/assertr
Assertive programming for R analysis pipelines
cdeldon/thermography
Automatic detection of defected solar panel modules
AllenInstitute/ecephys_spike_sorting
Modules for processing extracellular electrophysiology data from Neuropixels probes
1313e/PRISM
An alternative to MCMC for rapid analysis of models
genepi/cloudgene
A framework to build Software As A Service (SaaS) platforms for data analysis pipelines.
enormandeau/barque
eDNA metabarcoding pipeline
Mu-Sigma/analysis-pipelines
Enables data scientists to compose pipelines of analysis which consist of data manipulation, exploratory analysis & reporting, as well as modeling steps. Data scientists can use tools of their choice through an R interface, and compose interoperable pipelines between R, Spark, and Python.
USDA-VS/vSNP
vSNP -- validate SNPs
sdss/mangadap
The MaNGA Data Analysis Pipeline
ahujaraman/spark_kafka_tweet_analysis
What people are tweeting about now, in your desired location? Live Streaming of Twitter Data to Spark and Tweet Analysis application on various trends Eg: Trending HashTags, Trending Mentions etc. Location based features supported.
mkongsore/BlipFinder
Analysis pipeline capable of searching for dark compact objects in the Milky Way through astrometric lensing in real or mock Gaia DR4 data.
USDA-VS/vSNP3
vSNP -- validate SNPs
JetBrains-Research/bitcode-tools
Gradle tools to analyze bitcode of a Kotlin/Native project
WormLabCaltech/alaska
Automated and friendly RNA-seq analysis (deprecated)
abhijeetsingh1704/AcetoScan
AcetoScan - Automated pipeline for the unsupervised analysis of FTHFS amplicon sequencing
CTLife/PipiDABS
PipiDABS: A Comprehensive and User-Friendly Pipeline for Downstream DNA Methylation Analysis of High-throughput Bisulfite Sequencing Data.
ynikitenko/lena
Lena is an architectural framework for data analysis
weng-lab/krews
KREWS Scientific Data Pipeline Framework
FOGSEC/snake
snake - a malware storage zoo
peitek/eyetracking-analyses
Collection of Python scripts for various eye-tracking analyses for our fMRI studies
Stack-Train/jobs-data-analyzer
An easy-to-use tool for extracting insights from jobs data.
vrrenske/spotprocessR
code used in van Raaphorst, Kjos & Veening (2017), Chromosome segregation drives division site selection in Streptococcus pneumoniae, PNAS
danielmk/PatchSeq
An analysis pipeline for patch seq data, a combination of patch-clamp electrophysiology and single cell sequencing.
memobc/memolab-psychophys-pipeline
Repository home of the Memo Lab's Psychophysiology Pipeline
systemPipeR/SPatacseq
Workflow Template
AgenttiX/cloc-action
GitHub action to count lines of code with CLOC