batch-effect

There are 3 repositories under batch-effect topic.

  • epigen/spilterlize_integrate

    A Snakemake workflow to split, filter, normalize, integrate and select highly variable features of count matrices resulting from experiments with sequencing readout (e.g., RNA-seq, ATAC-seq, ChIP-seq, Methyl-seq, miRNA-seq,...) including diagnostic visualizations.

    Language:Python105130

  • HelloWorldLTY/AWGAN

    Codes for paper: AWGAN: A Powerful Batch Effect Removal Model for scRNA-seq Data

    Language:Jupyter Notebook7100

  • eleozzr/desc-nopage

    Deep Embedding for Single-cell Clustering. This repo has no files related to github page so that users can download it quickly.

    Language:Jupyter Notebook2200