bbmap
There are 3 repositories under bbmap topic.
erikrikarddaniel/magmap
Nextflow (nf-core) workflow for mapping reads to large collections of genomes.
SherineAwad/BulkRNASeq
Snakemake workflow for Bulk RNASeq at both genome level and transcripts level.
MaxGreil/sradcqc
Proof of concept of a SRA to trimmed FASTQ (including quality control) pipeline with Nextflow