bgc

There are 11 repositories under bgc topic.

  • nf-core/funcscan

    (Meta-)genome screening for functional and natural product gene sequences

    Language:Nextflow799616122

  • Kalan-Lab/zol

    zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)

    Language:Python562104

  • Kalan-Lab/lsaBGC

    lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters

    Language:Python37344

  • btmartin721/ClineHelpR

    Detects Outliers and plots genomic clines from BGC output, and extends the plotting functionality of INTROGRESS to Correlate genomic clines and hybrid indices with Environmental Variables

    Language:R152212

  • gvignolle/FunOrder

    The Functional Order (FunOrder) tool - Identification of essential biosynthetic genes through computational molecular co-evolution – novel tool that allows automated identification of essential genes in a biosynthetic gene clusters (BGC) based solely on genomic data

    6113

  • jorgecnavarrom/BGClib

    Methods and classes to support Biosynthetic Gene Cluster analysis

    Language:Python6141

  • ostash-group/BGCViz

    BGCViz - a shiny web app, which uses genomic coordinates of BGCs from different sources for a comprehensive comparison.

    Language:R6265

  • btmartin721/file_converters

    File conversion scripts for DNA sequence data

    Language:Python3222

  • pavlohrab/BGCViz

    BGCViz - a shiny web app, which uses genomic coordinates of BGCs from different sources for a comprehensive comparison.

    Language:R2001

  • bitgoldcoin-project/bitgoldcoin

    BGC Official Site

    Language:C++0200

  • gavinf97/thesisreal

    My final thesis project work from my Biomedical Genomics MSc undertaken at NUIG, 2021. Includes Nextflow, Snakemake, Bash, Python and R scripts.

    Language:Jupyter Notebook0100