bgzf

There are 8 repositories under bgzf topic.

  • mdshw5/pyfaidx

    Efficient pythonic random access to fasta subsequences

    Language:Python450914575

  • circulosmeos/gztool

    extract random-positioned data from gzip files with no penalty, including gzip tailing like with 'tail -f' !

    Language:C13061612

  • MatthewRalston/kmerdb

    Python bioinformatics CLI for k-mer counts and de Bruijn graphs

    Language:Python1221091

  • cielavenir/7bgzf

    bgzf/ciso/daxcr/dictzip/gzinga/migz/razf frontends using zlib/zlib-ng/7-zip/zopfli/libdeflate/miniz/libslz/igzip/cryptopp/kzip backends with parallel (de)compression. compilable with gcc/clang/icc/open64.

    Language:C10512

  • vivimice/bgzf-randreader

    A BGZF random access reader library

    Language:Java6201

  • circulosmeos/bgztail

    Continuous tail command (like `tail -f`) for bgzip files

    Language:Perl4100

  • chrovis/bgzf4j

    bgzf4j is a compression library for BGZF (Blocked GNU Zip Format)

    Language:Java1600

  • innovate-invent/bampy

    Python implementation of htslib supporting BAM, SAM, and BGZF compression

    Language:Python1100