bgzip

There are 7 repositories under bgzip topic.

  • divonlan/genozip

    A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, GFF/GTF/GVF, 23andMe...), up to 5x better than gzip and faster too

    Language:C15012311

  • circulosmeos/gztool

    extract random-positioned data from gzip files with no penalty, including gzip tailing like with 'tail -f' !

    Language:C12461612

  • 4dn-dcic/pairix

    1D/2D indexing and querying on bgzipped text file with a pair of genomic coordinates

    Language:C8391813

  • billzt/gff3sort

    GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools

    Language:Perl4651419

  • cielavenir/7bgzf

    bgzf/ciso/daxcr/dictzip/gzinga/migz/razf frontends using zlib/zlib-ng/7-zip/zopfli/libdeflate/miniz/libslz/igzip/cryptopp/kzip backends with parallel (de)compression. compilable with gcc/clang/icc/open64.

    Language:C10512

  • 4dn-dcic/Rpairix

    R binder for pairix - 2D/1D genomic indexing and querying on bgzipped text file

    Language:C86134

  • circulosmeos/bgztail

    Continuous tail command (like `tail -f`) for bgzip files

    Language:Perl4100