biocuration
There are 23 repositories under biocuration topic.
OBOFoundry/OBOFoundry.github.io
Metadata and website for the Open Bio Ontologies Foundry Ontology Registry
biopragmatics/bioregistry
📮 An integrative registry of biological databases, ontologies, and nomenclatures.
monarch-initiative/curate-gpt
LLM-driven curation assist tool (pre-alpha)
biopragmatics/biomappings
🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from primary sources.
cthoyt/doctoral-thesis
📖 Generation and Applications of Knowledge Graphs in Systems and Networks Biology
jakelever/pgxmine
Text mining for pharmacogenomic associations for PharmGKB
griffithlab/civic-v2
CIViC is an open access, open source, community-driven web resource for Clinical Interpretation of Variants in Cancer
GMOD/docker-apollo
:whale: Apollo 2.X Docker Image
monarch-initiative/HpoCaseAnnotator
Next-generation Biocuration App for annotating cases and PhenoPackets
bel-enrichment/bel-enrichment
A package for generating curation sheets for rationally enriching a BEL graph using INDRA and PyBEL
pharmacome/conso
The Curation of Neurodegeneration Supporting Ontology (CONSO)
pombase/curation
PomBase curation
biopragmatics/obo-db-ingest
🗄️ Conversion of biomedical nomenclatures like HGNC to OBO
pharmacome/conib
Curation of Neurodegeneration in Biological Expression Language (CONIB)
pharmacome/curation
Guidelines and procedures for curation (manual and semi-automated)
CoronaWhy/bel4corona
Code, notebooks, and resources for exploring and analyzing mechanistic knowledge graphs about 'rona
cthoyt/cthoyt.github.io
My personal website, served at https://cthoyt.com
bel-curation/pybel-git
Git and continuous integration tools for PyBEL to assist in curating BEL
lmichan/PFR
Proyecto de manejo de información digital sobre pruebas de función respiratoria mediante anotación semántica con Hypothes.is
bel-enrichment/results
An application of the rational enrichment workflow to ten subgraphs from NeuroMMSig for the Human Brain Pharmacome project (https://pharmacome.scai.fraunhofer.de)
BioComputingUP/apicuron-issue-tracker
This repository is dedicated to issue tracking for APICURON, a recognition tool for scientific databases
neurommsig/neurommsig-terminology
Terminologies used in NeuroMMSig and AETIONOMY
pharmacome/semi-automated-curation
Results from semi-automated curation with INDRA/PyBEL