bisulfite

There are 7 repositories under bisulfite topic.

  • dpryan79/MethylDackel

    A (mostly) universal methylation extractor for BS-seq experiments.

    Language:C156711042

  • khuang28jhu/bs3

    BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.

    Language:Python2533513

  • tadKeys/tabsat

    Targeted Amplicon Bisulfite Sequencing Analysis Tool

    Language:Perl112163

  • semenko/serpent-methylation-pipeline

    An efficient, documented, reproducible Snakemake methylation analysis pipeline for BS-seq and EM-seq samples, including cfDNA.

    Language:Python8342

  • sing-group/bicycle

    bicycle (bisulfite-based methylcytosine caller) is a next-generation sequencing bioinformatics pipeline able to perform a full DNA methylation level analysis

    Language:Java87101

  • BioInfoTools/BSVF

    Bisulfite Sequencing Virus integration Finder

    Language:C3305
  • CytoMeth

    mdraminski/CytoMeth

    CytoMeth tool compiles a set of open source software named in the Roche pipeline guidelines to perform SeqCap Epi data analysis.

    Language:R3201