blastp
There are 17 repositories under blastp topic.
idrblab/AnnoPRO
Feature map and function annotation of Proteins
brandonsie/epitopefindr
R package to BLAST peptide sequences against each other and identify the minimal overlap of aligning regions.
usadellab/prot-scriber
Assigns short human readable descriptions to biological sequences or gene families using references. For this, prot-scriber consumes sequence similarity search results in tabular format (Blast or Diamond).
cbalbin-bio/Submatch-BLAST-Parser
Parse consecutive matches in BLAST results.
LinyunLiu/Bioinformatics
Unraveling Evolutionary Relationship between Fungi Species
AstraBert/PredGenesGetPepts
PredGenesGetPepts is an easy-to-use, beginner-friendly pipeline to call genes from fasta files, retrieve peptides and blasting them against a given protein database
eannefawcett/Classifying-Gene-Locus-by-Protein-Composition
Modeling chromosomal gene location by protein composition
guzikine/pblast-heuristic-algorithm
This repository contains my implementation, that I built from scratch, of the heuristic blast algorithm used for DNA or protein sequence search against a massive database.
vizkidd/QuickBLAST
BLAST without Sys.Call()
ifremer-bioinformatics/BLAST-PLAST-bench
Scripts to run benchmarks of BLAST and PLAST on a supercomputer
mansikath/whole-genome-sequencing-pipeline
A comprehensive workflow for de novo assembly of whole-genome shotgun sequencing data using Velvet, followed by BLAST searches to analyze assembled contigs.
pselva7/PlantAKRsClassification
To classify plant ado-keto reductase-domain (PF00248) containing proteins via blastp search
sophiagosselin/ICE_BLAST
Iterative Cluster Expansion BLAST. Captures very divergent homologous sequences via gradual search space expansion.
victoria-r/BLASTandTransdecoder
Using BLAST and Transdecoder.
hocinebib/ResConservScorePy
Pipeline to get a protein's residues conservation JSD scores