bowtie
There are 15 repositories under bowtie topic.
StevenWingett/FastQ-Screen
Detecting contamination in NGS data and multi-species analysis
Edinburgh-Genome-Foundry/genome_collector
:stars: Easily download genomes and build BLAST/Bowtie indexes in Python
crisprVerse/Tutorials
Tutorials for the crisprVerse
chanzhou/AutoCirc
A computational toolkit of fast and automatical identification of back-splice junctions of potential circular RNAs (circRNAs) from RNA-seq data.
pjtorres/metagenomics_tutorial
Analyzing shotgun data
crisprVerse/crisprBowtie
Bowtie-based alignment of CRISPR gRNA spacer sequences
modupeore/VAP
VAP : For Reference mapping and Variant detection.
GeoRouv/chip-seq-analysis-replication
🔬 A replication of ChiP-Seq analysis from an experiment regarding gene induction and repression during terminal erythropoiesis that are mediated by distinct epigenetic changes
mahozad/graph-analysis
The project for the course "Web Information Retrieval"
t-makaro/TinkerTie
Code designed to run on Atom Computer's Tinker Tie. http://atomcomputer.us/tinkertie/
dgavr/Zebrafish_mappability
Different approaches to calculate mappability and GC-rich tracks for danio rerio genomes
DonQwerty/Genome-Aligners
This repository contains my end-of-degree project. I've implemented a simple version of three of the most known aligners like Bowtie, BWA and BWT-SM
cyschneck/Expanded-Smith-Waterman-Alignment
Expanded version of the traditional Smith Waterman algorithm for local alignment
nuno-agostinho/TopHat-docker
Docker to run TopHat for splice junction mapping
Wandmalfarbe/Bowtie-Theme-Big-Vinyl-Cover
A theme for Bowtie with a big 600px cover and CSS flip animation.