burrows-wheeler-transformation
There are 12 repositories under burrows-wheeler-transformation topic.
ElizaLo/Data-Compression-Methods
Hamming, Huffman and etc algorithms
sentenzo/bzip2
A (rookie makeshift improvised amateur suboptimal crude non-production-ready) bzip2 compression algorithm implementation from scratch.
weissenberger/bzip2gpu
Fast, GPU-based decompressor for bzip2 streams.
AndreaRubbi/Burrows-Wheeler-implementation
Python implementation of the Burrow Wheeler Algorithm with a GUI
lars76/pysais-utf8
Python C module for creating suffix, LCP and BWT arrays with UTF-8 text.
WillardFord/wf-align-CSE185
This tool aligns reads back to a reference genome. It is also my final project for CSE 185 Advanced Bioinformatics Lab. Won Best Presentation Award among 60+ student projects.
ZgzInfinity/Adhara
Practices of Algorithm for hard problems
MikoRabago/Bioinformatics-6-COMP-4312e-
A repository containing all the file projects that I have for the Bioinformatics 6 (COMP 4312e) course.
weihao94/Burrows-Wheeler-Transformation-and-its-Applications
MA3288 Advanced Undergraduate Research Opportunites (UROPS) in Mathematics I
dbelling/genomics
Several computational genomics projects
LauraRuffoni/ClientServer-Project
Implement a server (along with a corresponding client), that accepts a DNA sequence and returns its Burrows Wheeler Transform (BWT). It should also accept a BWT and return the corresponding original DNA sequence.
rohan-chandrashekar/String-Matching-using-Burrows-Wheeler-Alignment-BWA
A Python-based implementation of the Burrows-Wheeler Alignment (BWA) algorithm for DNA sequence matching. This project leverages core data structures including the Burrows-Wheeler Transform (BWT), Suffix Array (SA), and auxiliary arrays (C, Occ) to enable efficient and accurate substring matching. It focuses on an unoptimized, recursive depth-first