bwt
There are 77 repositories under bwt topic.
flanglet/kanzi-go
Fast lossless data compression in Go
seqan/seqan
SeqAn's official repository.
powturbo/TurboBench
Compression Benchmark
IlyaGrebnov/libsais
libsais is a library for linear time suffix array, longest common prefix array and burrows wheeler transform construction based on induced sorting algorithm.
flanglet/kanzi-cpp
Fast lossless data compression in C++
flanglet/kanzi
Fast lossless data compression in Java
lh3/ropebwt3
BWT construction and search
jzebedee/deltaq
Fast and portable delta encoding for .NET in 100% safe, managed code.
prophyle/prophyle
Accurate, resource-frugal and deterministic DNA sequence classifier.
IlyaGrebnov/libcubwt
libcubwt is a library for GPU accelerated suffix array and burrows wheeler transform construction.
michaelmaniscalco/msufsort
msufsort parallel suffix array construction algorithm
felipelouza/gsufsort
gsufsort: building suffix arrays, LCP-arrays and BWTs for string collections [AMB 2020]
loxxous/Jampack
Experimental parallel compression algorithm
zertovitch/zip-ada
Zip-Ada: a standalone, portable pure Ada library for .zip archives. Includes LZMA and BZip2 byte stream encoder & decoder pairs.
algbio/SBWT
Code for the paper Succinct k-mer Set Representations Using Subset Rank Queries on the Spectral Burrows-Wheeler Transform (SBWT)
bwt-dev/bwt-electrum-plugin
Electrum plugin for Bitcoin Wallet Tracker, a lightweight personal indexer for bitcoin wallets. Allows connecting Electrum to a Bitcoin Core full node backend.
shenwei356/bwt
Burrows-Wheeler Transform and FM-index in golang
wafflespeanut/nucleic-acid
BWT, FM-index and bits vector for analyzing DNA sequence data.
felipelouza/egsa
Generalized enhanced suffix array construction in external memory [CPM'13, AMB 2017]
dkarv/hacs-bwt-perla
Custom HA integration for BWT Perla devices
michaelmaniscalco/m99
novel high throughput entropy encoder for BWT data
RagnarGrootKoerkamp/alg-viz
String algorithm visualizations
dfguan/deSPI
fast classification of metagenomic sequences with lightweight de Bruijin graph-based reference indexing
HudsonAlpha/rust-msbwt
place for building up a msbwt resource in Rust
Bouni/esphome-bwt-sensor
Determine the state of a BWT AQA Life S decalcifier using an ESP32 + TCS34725 color sensor and integrate into Home-Assistant using ESPHome
kampersanda/rcomp
C++17 implementation of online RLBWT construction in optimal-time and BWT-runs bounded space
jnalanko/VOMM
Space-efficient variable-order Markov models
prophyle/prophex
ProPhex – an exact k-mer index using Burrows-Wheeler Transform
bwt-dev/libbwt
C FFI for Bitcoin Wallet Tracker, a lightweight personal indexer for bitcoin wallets
dabane-ghassan/dnazip
A Python implementation of The Burrows-Wheeler Transform alongside Huffman coding on DNA sequences.
FatemehGholamzadeh/BWT-on-Gene-Sequence
implementation of Burrows–Wheeler transform on a Gene Sequence - Bioinformatics Course - Fall 2019
giuseppe16180/kotlin-coding-theory
Coding Theory algorithms in Kotlin
laserbat/glitch
Glitchart generator based on compression with errors
lucaparmigiani/rnd_dbseq
Generate any random de Bruijn sequence fast and efficiently
TA2k/ioBroker.bwt
ioBroker Adapter for BWT devices